An Accounting Ledger Method for Determining Lewis Dot Structures

Submitted by Chris Bailey / Wells College on Sat, 07/19/2014 - 19:45
Description

Over several decades of teaching General Chemistry I have utilized various methods to get students to draw appropriate Lewis Dot Structures. About 10 years ago I learned about a process which I call the "Account Ledger Method". In this method all valence electrons are assumed to initially belong to the molecule (and placed in a ledger) and not to specific individual atoms. As the molecule is put together those electrons are distributed systematically and removed from the ledger.

A cuprous azide complex: The effect of structure on the stability of the azide ion

Submitted by Jim Jeitler / Marietta College on Thu, 07/17/2014 - 17:50
Description

This is a problem set based on the article "Energetic Cuprous Azide Complex: Synthesis, Crystal Structure and Effection on the Thermal Decomposition of HMX" in the Journal of Chemical Crystallography.  It has been used in a Chemistry Capstone course for both Chemistry and Biochemistry majors during the first semester senior year.  Biochemistry majors are not required to take Inorganic Chemistry and Chemistry majors may be currently taking Inorganic chemistry.

Utilizing the PDB and HSAB theory to understand metal specificity in trafficking proteins

Submitted by EGunn / Simmons College on Thu, 07/17/2014 - 15:19
Description

This is an in-class PDB exercise based on the paper "Mechanisms Controlling the Cellular Metal Economy" by Gilston and O'Halloran. Students are asked to visualize the metal binding sites of several proteins discussed in the paper, highlighting unusual metal geometries. After identifying the amino acid residues involved in metal binding, students will discuss the bond structure in terms of HSAB theory. 

Principles and imaging applications of CEST

Submitted by Justin / Northwestern University on Thu, 07/17/2014 - 15:19
Description

This five slides about chemical exchange transfer (CEST) discusses the magnetic properties of paramagnetic metal ions and their use as MR imaging agents. This includes tranditional contrast agents that affect the relaxation rate of nearby water protons and paramagnetic shift reagents suitable for CEST imaging applications. A recent redox-active cobalt complex is presented as an innovative agent for mapping redox imbalances in vivo.

Literature Discussion of "Mechanisms Controlling the Cellular Metal Economy"

Submitted by Kyle Grice / DePaul University on Thu, 07/17/2014 - 15:07
Description

This is a literature discussion of a review by Tom O'Halloran (The link to the paper is included in the "Web Resources" below). The review covers concepts of metal content in cells, metal trasport, storage, and regulation. Its a good review to start a broader or deeper discussion about metals in biology. We have provided some questions to help guide the student discussion. These questions can be given to students prior to coming to class, and the answers can either be used for the in-class discussion and/or collected. 

Cobalt Schiff Base Zinc Finger Inhibitors

Submitted by Peter Craig / McDaniel College on Thu, 07/17/2014 - 13:08
Description

This is a literature discussion based on the paper “Spectroscopic Elucidation of the Inhibitory Mechanism of Cys2

Exploring Post-Translational Modification with DFT

Submitted by Gerard Rowe / University of South Carolina Aiken on Thu, 07/17/2014 - 12:52
Description

This activity is designed to give students a deeper understanding of what post-translational modification does in a metalloenzyme using nitrile hydratase (NHase) as a model system.  The metallo-active site of NHase contains a cobalt(III) center that is bound to an unusual coodination sphere containing bis-amidate, cysteinate, sulfenate (RSO-), and sulfinate (RSO2-) ligands.

Having fun with your own molecular models

Submitted by Arpita Saha / Georgia Southern University on Wed, 07/16/2014 - 15:04
Description

This is a fun chemistry project where students make model compounds to learn various structural aspects of the compound. This is an individual project that is each student is assigned with one compound.  They can use any item (for e.g. Styrofoam balls etc) to make their very own model compound. The model should contain all the atoms (visually distinctive), bonds, lone pairs. Student is expected to create something novel rather using molecular model kit. They can use text book and lecture material for the resources.

Examining and Drawing Atomic Orbitals

Submitted by Chris Goh / Williams College on Tue, 07/15/2014 - 23:57
Description

This exercise makes use of a web-based tool to review quantum numbers of the orbitals of the hydrogen atom and to visualize atomic orbitals in 3D. Students are asked to draw the 1s-, 2p- and 3d-orbitals.