The Structure and Function of Transferrin

Submitted by Chris Bailey / Wells College on Tue, 07/22/2014 - 14:51
Description

These Five Slides About examine the structure and function of the iron binding and transport protein transferrin. Students learn that transferrin also acts as an iron buffer and as a potential antimicrobial agent. The structure of the protein is explored in detail; it consists of a single polypeptide (80kDa) folded into two lobes, each of which can bind a single iron in a high affinity region. Changes in the protein as a result of iron uptake is discussed. The iron binding region and the requirement of a bidentate synergistic anion (carbonate) are examined.

An Accounting Ledger Method for Determining Lewis Dot Structures

Submitted by Chris Bailey / Wells College on Sat, 07/19/2014 - 19:45
Description

Over several decades of teaching General Chemistry I have utilized various methods to get students to draw appropriate Lewis Dot Structures. About 10 years ago I learned about a process which I call the "Account Ledger Method". In this method all valence electrons are assumed to initially belong to the molecule (and placed in a ledger) and not to specific individual atoms. As the molecule is put together those electrons are distributed systematically and removed from the ledger.

Modeling post-translational modification in cobalt nitrile hydratase with a metallopeptide from Anne Jones

Submitted by Kari Young / Centre College on Thu, 07/17/2014 - 16:23
Description

In this literature discussion, students read a paper about a cobalt metallopeptide that imitates the active site of the enzyme nitrile hydratase.  Specifically, the model complex is oxidized by air to produce a coordination sphere with both cysteine thiolate and sulfinic acid ligands, much like the post-translationally oxidized cysteine ligands in the biological system.

Cobalt Schiff Base Zinc Finger Inhibitors

Submitted by Peter Craig / McDaniel College on Thu, 07/17/2014 - 13:08
Description

This is a literature discussion based on the paper “Spectroscopic Elucidation of the Inhibitory Mechanism of Cys2

Exploring Post-Translational Modification with DFT

Submitted by Gerard Rowe / University of South Carolina Aiken on Thu, 07/17/2014 - 12:52
Description

This activity is designed to give students a deeper understanding of what post-translational modification does in a metalloenzyme using nitrile hydratase (NHase) as a model system.  The metallo-active site of NHase contains a cobalt(III) center that is bound to an unusual coodination sphere containing bis-amidate, cysteinate, sulfenate (RSO-), and sulfinate (RSO2-) ligands.

Having fun with your own molecular models

Submitted by Arpita Saha / Georgia Southern University on Wed, 07/16/2014 - 15:04
Description

This is a fun chemistry project where students make model compounds to learn various structural aspects of the compound. This is an individual project that is each student is assigned with one compound.  They can use any item (for e.g. Styrofoam balls etc) to make their very own model compound. The model should contain all the atoms (visually distinctive), bonds, lone pairs. Student is expected to create something novel rather using molecular model kit. They can use text book and lecture material for the resources.

Hard Soft Acid Base Theory - Coordination Trends in Alkali Metal Crown Ether Uranyl Halide Complexes: The Series [A(Crown)]2[UO2X4] Where A = Li, Na, K, and X = Cl, Br

Submitted by Gerard Rowe / University of South Carolina Aiken on Tue, 07/01/2014 - 11:13
Description

In this literature discussion, students are asked to read an article describing a series of uranyl halide compounds that contain an alkali counterion that interacts with one or more of the uranium's ligand atoms.  This paper stands out as a great example of the binding preferences of acids and bases, and can be explained very well using simple HSAB concepts.

Coordination complexes and crystal field theory in-class worksheet

Submitted by Sarah K. St. Angelo / Dickinson College on Mon, 04/28/2014 - 18:39
Description

This is an in-class activity that I made to help students in my second semester general chemistry course work through some aspects of color and coordination chemistry.  The activity was performed with a demonstration of color for nickel coordination complexes (ligands: water, ethylenediamine, and ammonia). I also included equilibria and thermodynamics as those concepts apply to coordination compounds at the introductory level.  This served as a review of the concepts as well.

Molecular Orbitals of Square-Planar Tetrahydrides

Submitted by Matt Whited / Carleton College on Fri, 04/18/2014 - 10:15
Description

This in-class activity walks students through the preparation of a molecular-orbital diagram for methane in a square-planar environment.  The students generate ligand-group orbitals (LGOs) for the set of 4 H(1s) orbitals and then interact these with carbon, ultimately finding that such a geometry is strongly disfavored because it does not maximize H/C bonding and leaves a lone pair on C.